create_windows_from_events(concat_ds, trial_start_offset_samples, trial_stop_offset_samples, window_size_samples=None, window_stride_samples=None, drop_last_window=False, mapping=None, preload=False, drop_bad_windows=True, picks=None, reject=None, flat=None, on_missing='error')¶
Create windows based on events in mne.Raw.
This function extracts windows of size window_size_samples in the interval [trial onset + trial_start_offset_samples, trial onset + trial duration + trial_stop_offset_samples] around each trial, with a separation of window_stride_samples between consecutive windows. If the last window around an event does not end at trial_stop_offset_samples and drop_last_window is set to False, an additional overlapping window that ends at trial_stop_offset_samples is created.
Windows are extracted from the interval defined by the following:
trial onset +
trial onset duration
- concat_ds: BaseConcatDataset
A concat of base datasets each holding raw and description.
- trial_start_offset_samples: int
Start offset from original trial onsets, in samples.
- trial_stop_offset_samples: int
Stop offset from original trial stop, in samples.
- window_size_samples: int | None
Window size. If None, the window size is inferred from the original trial size of the first trial and trial_start_offset_samples and trial_stop_offset_samples.
- window_stride_samples: int | None
Stride between windows, in samples. If None, the window size is inferred from the original trial size of the first trial and trial_start_offset_samples and trial_stop_offset_samples.
- drop_last_window: bool
If True, an additional overlapping window that ends at trial_stop_offset_samples will be extracted around each event when the last window does not end exactly at trial_stop_offset_samples.
- mapping: dict(str: int)
Mapping from event description to numerical target value.
- preload: bool
If True, preload the data of the Epochs objects. This is useful to reduce disk reading overhead when returning windows in a training scenario, however very large data might not fit into memory.
- drop_bad_windows: bool
If True, call .drop_bad() on the resulting mne.Epochs object. This step allows identifying e.g., windows that fall outside of the continuous recording. It is suggested to run this step here as otherwise the BaseConcatDataset has to be updated as well.
- picks: str | list | slice | None
Channels to include. If None, all available channels are used. See mne.Epochs.
- reject: dict | None
Epoch rejection parameters based on peak-to-peak amplitude. If None, no rejection is done based on peak-to-peak amplitude. See mne.Epochs.
- flat: dict | None
Epoch rejection parameters based on flatness of signals. If None, no rejection based on flatness is done. See mne.Epochs.
- on_missing: str
What to do if one or several event ids are not found in the recording. Valid keys are ‘error’ | ‘warning’ | ‘ignore’. See mne.Epochs.
- windows_ds: WindowsDataset
Dataset containing the extracted windows.